PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028094046.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 160aa    MW: 18385.9 Da    PI: 9.7518
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028094046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.21.6e-2430118189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     +fYne+++ +GFs+r+++++  k++g+it+r+fvCske +r+e+k++ +k++++++etrtgCk ++ v+ +k +++++v++++++HnH+l
  XP_028094046.1  30 DFYNEFGQITGFSLRMEYTNACKKTGRITSRRFVCSKERFRREDKRD-DKTKNSHQETRTGCKERMSVSFNKnRQNYVVIDFVEDHNHPL 118
                     6*******************************************999.9********************99999**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MCEAISSSLT ILDYKPQMGL EFDSLDAAKD FYNEFGQITG FSLRMEYTNA CKKTGRITSR  60
RFVCSKERFR REDKRDDKTK NSHQETRTGC KERMSVSFNK NRQNYVVIDF VEDHNHPLHI  120
PGCVHLMPSQ RKIAKAQAIA ADLAEASGIR LRSTFKLASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-16FAR1 family protein