PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094243.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 403aa MW: 46825.2 Da PI: 6.9384

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.9	1.2e-11	47	133	3	90
FAR1 3 YneYAk..evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YAk ++GF v ++++ ++ge++ C++ kr+++++ + +++ + ++Ckak++ +++kdg++++t+++leH+H+l XP_028094243.1 47 YSFYAKyvKLGFAVAYRTQNIG-QDGEVKYFGVECTRARKRTKRSEI--HPLEPSLLSFIDCKAKVRATLQKDGRFKLTTVVLEHTHDLI 133 777776336799999887776.8999*************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDIDSTNPSL NRSEEVEDAE NNPSLNDIGE VEEPIKGMCF SSKQEVYSFY AKYVKLGFAV 60 AYRTQNIGQD GEVKYFGVEC TRARKRTKRS EIHPLEPSLL SFIDCKAKVR ATLQKDGRFK 120 LTTVVLEHTH DLIPSDSRHF VMNKRILTPV KRRLEINDEA GIGVARNFHS IVVEAGGYEA 180 LTFDKQDARN HIQRVNHHGQ SILLGCGLVS NENTETFVWL FKEWLSCMSD VPPKAIITNQ 240 CRAMQNAIEV VFPEARHRWC LWHIMKKIPE KLRGYTQYES IKLALQNAVY DCFTKHEFDE 300 EWEAMIGKFN LDDNDWLGVL YSERHKWIPA YVKDVFWVGM STTQRSESMN AFFDGYVNSK 360 TTLKQFVEQY DNALRSKVEK EMKADFKSRN KLYDCLTIYE FEK

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDIDSTNPSL NRSEEVEDAE NNPSLNDIGE VEEPIKGMCF SSKQEVYSFY AKYVKLGFAV  60
AYRTQNIGQD GEVKYFGVEC TRARKRTKRS EIHPLEPSLL SFIDCKAKVR ATLQKDGRFK  120
LTTVVLEHTH DLIPSDSRHF VMNKRILTPV KRRLEINDEA GIGVARNFHS IVVEAGGYEA  180
LTFDKQDARN HIQRVNHHGQ SILLGCGLVS NENTETFVWL FKEWLSCMSD VPPKAIITNQ  240
CRAMQNAIEV VFPEARHRWC LWHIMKKIPE KLRGYTQYES IKLALQNAVY DCFTKHEFDE  300
EWEAMIGKFN LDDNDWLGVL YSERHKWIPA YVKDVFWVGM STTQRSESMN AFFDGYVNSK  360
TTLKQFVEQY DNALRSKVEK EMKADFKSRN KLYDCLTIYE FEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-56	FAR1 family protein