PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094274.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 589aa MW: 66892.5 Da PI: 8.1761

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094274.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.8	2.1e-19	68	161	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs++ks+ +++ ++g++++r + Cs+eg+r + + ek+r ++a r+gCka+++++ + gk++vt++ +HnHela XP_028094274.1 68 FYNAYAKAKGFSIQKSRFNTN-KEGKVVSRLWLCSREGQRLPIYLDrvVEKSRAPKALIRVGCKAQFRIRYDAdaseGGKYVVTHFIADHNHELA 161 9**************9999.666699999*****99877766899999***********9987666789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MNESWVEPYH GCEAGSSNEE ATNMNVEDSG ADVKKEMVDD AHGNDMVGDI ERAILEQKFD 60 SVEDGEAFYN AYAKAKGFSI QKSRFNTNKE GKVVSRLWLC SREGQRLPIY LDRVVEKSRA 120 PKALIRVGCK AQFRIRYDAD ASEGGKYVVT HFIADHNHEL AEPLCVMYLR SHCRLNSADK 180 SQAMAMRNVG VKTSQIIDYM VNQSGSYENV SFVHSKSQGD YAKFGNVLIF DSTYRTNAYK 240 KPFVMLAGVT SHFRTTIFAC VLLANETIET YTWVLETFME AMGNKASVSV LTDGNKAMRE 300 AIRRVFPDAR HQLCNWRLGK NTVSNVHISG FAHAFKQCMD MEMDETKFEH GWTTMVEKFG 360 LQTNSWVLET YEKLHMWAEA YMRGHFFAGT KSTQHSECMN AYFNPFLQHK LKLYEFVRHY 420 DRALARIRYN EAGDDAETNN TFPTARYGIL SSSYNEMCFY ASQSTEGFKE ARDACLPLTS 480 RMKELYERNL NDGNGDKGKH SFPRQFGVKD PDAVKTKGNP GRASSNCRRL RKCGNCKCIG 540 HTKRTCPKVR FSRTVGTNID VDTPHITDCE YNAESLPVHC KGGSKYTAH

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MNESWVEPYH GCEAGSSNEE ATNMNVEDSG ADVKKEMVDD AHGNDMVGDI ERAILEQKFD  60
SVEDGEAFYN AYAKAKGFSI QKSRFNTNKE GKVVSRLWLC SREGQRLPIY LDRVVEKSRA  120
PKALIRVGCK AQFRIRYDAD ASEGGKYVVT HFIADHNHEL AEPLCVMYLR SHCRLNSADK  180
SQAMAMRNVG VKTSQIIDYM VNQSGSYENV SFVHSKSQGD YAKFGNVLIF DSTYRTNAYK  240
KPFVMLAGVT SHFRTTIFAC VLLANETIET YTWVLETFME AMGNKASVSV LTDGNKAMRE  300
AIRRVFPDAR HQLCNWRLGK NTVSNVHISG FAHAFKQCMD MEMDETKFEH GWTTMVEKFG  360
LQTNSWVLET YEKLHMWAEA YMRGHFFAGT KSTQHSECMN AYFNPFLQHK LKLYEFVRHY  420
DRALARIRYN EAGDDAETNN TFPTARYGIL SSSYNEMCFY ASQSTEGFKE ARDACLPLTS  480
RMKELYERNL NDGNGDKGKH SFPRQFGVKD PDAVKTKGNP GRASSNCRRL RKCGNCKCIG  540
HTKRTCPKVR FSRTVGTNID VDTPHITDCE YNAESLPVHC KGGSKYTAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-58	FAR1 family protein