PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094278.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 165aa MW: 18110 Da PI: 10.6139

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00079	43	65	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H XP_028094278.1 43 FTCKTCNREFSSFQALGGHRASH 65 89**********99999998887 PP
2	zf-C2H2	11.7	0.0008	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F L H+r+H XP_028094278.1 90 HECSICGLEFAMGQALGGHMRRH 112 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MTMAILKRSR EDTEVEALAM ANCLMLLSRV GETTSTKGRD RVFTCKTCNR EFSSFQALGG 60 HRASHKKLRL MGGGDLHVQT PSSPVKGKTH ECSICGLEFA MGQALGGHMR RHRDSSSPST 120 AQAVIPVLKK SNSSNGSKRV LSLDLNLTPY ENHMKIKKLP TWLIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-42	C2H2 family protein