PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094564.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 360aa MW: 41770.7 Da PI: 6.5177

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.2	1.7e-10	65	110	2	47
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 fYn+Y k +GFsvrks+++ + +n+ + +r++vCs+eg re++ + XP_028094564.1 65 FYNAYTKVIGFSVRKSRKRITGDNKFVESRKWVCSREGVREKKYLQ 110 ****************************************998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MDEPESIRHK EVNTEIDDQF APDGKDDVVN VKEGLASQTY DSLRMLTKED VFQMKFNSED 60 DAYTFYNAYT KVIGFSVRKS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERSGGYEK 120 VGFIHRDLHN QFQAERKVQL AEGDAECALG YLSAKLDADP LFFFKYIVDK NNRLDKIFWA 180 DCRSPMDYAA FGDVLVFDTT YRTNAYKKPF VILAGVSNHF MTTIFGCALL PDETMDIAIP 240 GLLQGVTMET YMWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR HRLCSWHLEK 300 NASTNVHILE FTTDFAQLML KKCKIDEFDN AWAAMVKQYK LENNNWVLDI HLKRDNWAEA

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MDEPESIRHK EVNTEIDDQF APDGKDDVVN VKEGLASQTY DSLRMLTKED VFQMKFNSED  60
DAYTFYNAYT KVIGFSVRKS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERSGGYEK  120
VGFIHRDLHN QFQAERKVQL AEGDAECALG YLSAKLDADP LFFFKYIVDK NNRLDKIFWA  180
DCRSPMDYAA FGDVLVFDTT YRTNAYKKPF VILAGVSNHF MTTIFGCALL PDETMDIAIP  240
GLLQGVTMET YMWVLEMLME AMDGKRPISV VTDGDRAMRQ AIKRVIPNCR HRLCSWHLEK  300
NASTNVHILE FTTDFAQLML KKCKIDEFDN AWAAMVKQYK LENNNWVLDI HLKRDNWAEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	3e-47	FAR1 family protein