PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094569.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 853aa MW: 96416.8 Da PI: 6.842

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	114	8.2e-36	2	73	47	118
CG-1 47 vryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 +r+frkDGy+wkkkkdgktv+E+he+LKvg+ e +++yYah+e+n+tf rrcywlL+++le+ivlvhy+e++ XP_028094569.1 2 LRNFRKDGYNWKKKKDGKTVKEAHEHLKVGNEEKIHVYYAHGEDNSTFVRRCYWLLDKTLEHIVLVHYRETQ 73 79*******************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MLRNFRKDGY NWKKKKDGKT VKEAHEHLKV GNEEKIHVYY AHGEDNSTFV RRCYWLLDKT 60 LEHIVLVHYR ETQEGSPATP VNSNSRSALS DQSASWLLSE ESDSGADPVY HAAEKAQLGY 120 EPGGSMTHKN HEMTLHEINT LEWEELLVLD DPSKLSAPDG GKTSCFEQQN QYETNGLTTN 180 GNIIPSANKL PTENSFRSLS EPIARSNSIH FNILENLRLQ MMESQTNSNL QKKDYQLGTV 240 GTGETLDIIG KDGLQTQDSF GRWINYIMAD SPGSVDDLEF SIQSSHESST SPMMDHLQSS 300 VPVQIFTITD VSPGWAFSTE ETKILITGFF NDPHLAKSDI YCVCGDACGP AEIVQSGVFR 360 CLVSPHTPGS VNLYLSFDGH NPISQVLTFE YRAPLTGNWM ISAEEMSNWE KFRVQMRLAH 420 LLFSTSKSLN FLSSKVSPDT LKEAKKFAHK TSHIADGWAY MIESIENNKI SFQQAKDSLF 480 ELALKNRLYE WLLERVVEGC ITSDRDEQGQ GVIHLCSILD YTWAVYPFAC SGLSLDYRDK 540 FGWTALHWAA YCGREKMVAA LLSAGAKPNL VTDPNSENPG GCTAADLASI EGYDGLAAYL 600 AEKGLVEHFK EMTIAGNVSG SLQTSTPDSV NLRNLSKEEL YLKDTLAAYR TAADAAARIQ 660 AAFREHSFKL RAKAIEFSNP ENEARSIIAA MKIQHAFRNY ESRKTMAAAA RIQHRFRTWK 720 TRREFLNMRC QVIKIQAVFR GFQVRKQYRK ITWSVGVLEK AILRWRMKRR GFRGFQVLPA 780 EAANDPMQES DVEEDFFRAS RKQAEQRVER SVVRVQAMFR SKKAQQEYQM MKLAHNQARL 840 EYEGLVSPDI DMG

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MLRNFRKDGY NWKKKKDGKT VKEAHEHLKV GNEEKIHVYY AHGEDNSTFV RRCYWLLDKT  60
LEHIVLVHYR ETQEGSPATP VNSNSRSALS DQSASWLLSE ESDSGADPVY HAAEKAQLGY  120
EPGGSMTHKN HEMTLHEINT LEWEELLVLD DPSKLSAPDG GKTSCFEQQN QYETNGLTTN  180
GNIIPSANKL PTENSFRSLS EPIARSNSIH FNILENLRLQ MMESQTNSNL QKKDYQLGTV  240
GTGETLDIIG KDGLQTQDSF GRWINYIMAD SPGSVDDLEF SIQSSHESST SPMMDHLQSS  300
VPVQIFTITD VSPGWAFSTE ETKILITGFF NDPHLAKSDI YCVCGDACGP AEIVQSGVFR  360
CLVSPHTPGS VNLYLSFDGH NPISQVLTFE YRAPLTGNWM ISAEEMSNWE KFRVQMRLAH  420
LLFSTSKSLN FLSSKVSPDT LKEAKKFAHK TSHIADGWAY MIESIENNKI SFQQAKDSLF  480
ELALKNRLYE WLLERVVEGC ITSDRDEQGQ GVIHLCSILD YTWAVYPFAC SGLSLDYRDK  540
FGWTALHWAA YCGREKMVAA LLSAGAKPNL VTDPNSENPG GCTAADLASI EGYDGLAAYL  600
AEKGLVEHFK EMTIAGNVSG SLQTSTPDSV NLRNLSKEEL YLKDTLAAYR TAADAAARIQ  660
AAFREHSFKL RAKAIEFSNP ENEARSIIAA MKIQHAFRNY ESRKTMAAAA RIQHRFRTWK  720
TRREFLNMRC QVIKIQAVFR GFQVRKQYRK ITWSVGVLEK AILRWRMKRR GFRGFQVLPA  780
EAANDPMQES DVEEDFFRAS RKQAEQRVER SVVRVQAMFR SKKAQQEYQM MKLAHNQARL  840
EYEGLVSPDI DMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein