PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094615.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 301aa MW: 34183.5 Da PI: 7.0644

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.3	2.2e-22	31	125	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHel 89 +fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek+r ++a tr++Cka+++++ + gk++vt+++ +HnHel XP_028094615.1 31 DFYNAYAKAKGFSIRKSRFNTN-KEGKVISRLWLCSREGQRLPKYLDrvAEKSRAPKALTRVDCKAQFRIRYDAdageGGKYVVTHFVADHNHEL 124 6***************9999.666799********99988877899999************987677789************9 PP FAR1 90 a 90 a XP_028094615.1 125 A 125 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MVDDAHRNDM VGDVERAILE QKFDSVKDGE DFYNAYAKAK GFSIRKSRFN TNKEGKVISR 60 LWLCSREGQR LPKYLDRVAE KSRAPKALTR VDCKAQFRIR YDADAGEGGK YVVTHFVADH 120 NHELAEQHCV MYLRSHHSLN SGDKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFIRTD 180 LHNHIQAERR AEVEDGDAQG ALVYLCAKLD VDAPNETIET HTWVLETFME AMGNKAPVSV 240 LTDGDKAMRE AIRRVFPDAR HRLCNWHLGK NAVSNVHISG FAHAFKQCMD METDETKFEH 300 G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-23	FAR1 family protein