PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094632.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 514aa MW: 58526.3 Da PI: 6.0807

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094632.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.9	7.5e-09	83	129	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 +ek+ ++a tr+gCka+++++ + gk++vt+++ +HnHel XP_028094632.1 83 AEKSTAPKALTRVGCKAQFHIRYDAdageGGKYVVTHFVADHNHELE 129 5788889*************987677789************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MAPAEVKREG DDYDIPNEAD DIHLMNESRA EPDHGCEAGP SNEEATNMNV EDGGADVKKE 60 MVDDAHRNDI VGQRLPKYLD RVAEKSTAPK ALTRVGCKAQ FHIRYDADAG EGGKYVVTHF 120 VADHNHELEE QHCVMYLRSH RSLNSADKAQ AMAMRNVGVK TSQIMDYMEN QSGSYENVGF 180 IRTDLHNHIQ AERRVEVEDS DAQGALVYLC AKLDVDAPNE TIETYTWVLE TFMEAMGNKA 240 PVSVLTDGDK SMREAIRRVF PDARHRLCNW HLGKNAVSNV HISGFAHAFK QCMDMNWHLG 300 KNAISNVHIS GFAHAFKQCM DMETDKTKFE RGWTTMVEKF GLQTNSWVLE TYEKRHMWAE 360 AYMRRHFFAG MKSTQRSECM NAYFNPFLQH KLKLYEFVRH YDRALARIRY NEAGDDAETN 420 NNFPVRFSRT VGTNSDADTP HITDREYNAE SLPVCCKIGL VDPSTPHIKQ RRLFFDVSPN 480 SKQPVGQYGS VEAAVWKNDS NTIDEVNQVD STSY

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MAPAEVKREG DDYDIPNEAD DIHLMNESRA EPDHGCEAGP SNEEATNMNV EDGGADVKKE  60
MVDDAHRNDI VGQRLPKYLD RVAEKSTAPK ALTRVGCKAQ FHIRYDADAG EGGKYVVTHF  120
VADHNHELEE QHCVMYLRSH RSLNSADKAQ AMAMRNVGVK TSQIMDYMEN QSGSYENVGF  180
IRTDLHNHIQ AERRVEVEDS DAQGALVYLC AKLDVDAPNE TIETYTWVLE TFMEAMGNKA  240
PVSVLTDGDK SMREAIRRVF PDARHRLCNW HLGKNAVSNV HISGFAHAFK QCMDMNWHLG  300
KNAISNVHIS GFAHAFKQCM DMETDKTKFE RGWTTMVEKF GLQTNSWVLE TYEKRHMWAE  360
AYMRRHFFAG MKSTQRSECM NAYFNPFLQH KLKLYEFVRH YDRALARIRY NEAGDDAETN  420
NNFPVRFSRT VGTNSDADTP HITDREYNAE SLPVCCKIGL VDPSTPHIKQ RRLFFDVSPN  480
SKQPVGQYGS VEAAVWKNDS NTIDEVNQVD STSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-32	FAR1 family protein