PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028094971.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 221aa    MW: 24822.9 Da    PI: 9.5731
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028094971.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44.1e-112573354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_028094971.1 25 MSHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 73
                    79*************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MEMRITRSRN KAIQKSLIVV NNQNMSHIAV ERNRRRQMNE HLKVLRSLTP CFYIKRGDQA  60
SIIGGVIEFI KELHQVLQSL ESKKQRKSLS PSPGPSPRSL QLTPPQPPDS PFGTENVKEL  120
GLGACCNSLV ADVEAKISGS NVILRTVSRR IPGQIVRIIN VLEKFSFEIL HLNISSMEDT  180
VLYSFVIKIG LECQLSVEEL ALEVQKSFCS DAVYVNKILE P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-85bHLH family protein