PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095240.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 189aa MW: 21350.2 Da PI: 9.9198

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.1e-25	127	171	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRCs++v++++k+C+rH+hrgr+rsrk++e+ XP_028095240.1 127 EPEPGRCRRTDGKKWRCSKDVVPNHKYCQRHIHRGRHRSRKHVET 171 69****************************************997 PP
2	QLQ	46.6	1.1e-16	54	89	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT Q q+L++Q+l+y y+ a++ vPp+L+++i+k XP_028095240.1 54 GFTFLQMQELEQQALIYNYIEAGLAVPPHLVLPIWK 89 69*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MEPQNPPPKI ARLADNATSR TSCREVSPPT GLGLSLELGH HRSSNRHGCS KSSGFTFLQM 60 QELEQQALIY NYIEAGLAVP PHLVLPIWKS FAGYLSSVNG ACLQQQYFAN LVMGHSPLYY 120 DYKNSMEPEP GRCRRTDGKK WRCSKDVVPN HKYCQRHIHR GRHRSRKHVE TPQLLRTTST 180 TNTTSTSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	6e-37	GRF family protein