PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095351.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 224aa    MW: 24909.2 Da    PI: 5.2309
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.7e-1184131555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +  rE+ RRd++N++f eL ++l +    + +K +Ka+iL  Av+ + +Lq
  XP_028095351.1  84 KACREKLRRDKLNERFLELGSVLEPG---RPPKTDKAAILSDAVRMVTQLQ 131
                     678**********************8...89******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEIDPSENSD WFFDYGLIED VSTVPAGHFT EPPPPCIVWP SQALNGSSNA SVEIDCSFGD  60
SESLKEAGSR KRVKSESCSV SGSKACREKL RRDKLNERFL ELGSVLEPGR PPKTDKAAIL  120
SDAVRMVTQL QSEAQKLRES NDDLHEKIKE LKAEKTELRD EKQRLKAEKE KLEQQVKGMS  180
AQPGMSAGDK LMPFIGYPGV AMWQFIPPTV RDTSQDHVLH PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-84bHLH family protein