PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095382.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 435aa    MW: 48990.9 Da    PI: 5.1592
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.61.4e-87424282373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfs 94 
                     ++lLl+cA a++s+d++l+q++++ l++ as  gdp+qRl++ f +AL a+ +r  ++ ++   +s+ +     + +++ +l  ++++ P+++f+
  XP_028095382.1  42 EKLLLHCASALESNDATLVQQVMWVLNNVASTVGDPNQRLTSWFSRALIAKASRVFPTAMNFNGSSTVH----RRMMSVIELagYVDLIPWHRFG 132
                     689***************************************************777666555444444....34444444455*********** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl..... 181
                     + + N+aI  a++g+++vH++Df+i++++QWp+L++aLa+RpegppslRi +     ++    + ++ee+g rLa+fA+ +++pfefnv+     
  XP_028095382.1 133 FCASNSAIFIAIQGCSKVHVLDFSITHCMQWPTLIDALAKRPEGPPSLRISVPYWRPQVppfLNVSMEEVGLRLANFAKLIDLPFEFNVIedlss 227
                     ***************************************************9766444468899**************************99987 PP

            GRAS 182 ........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
                             + + l++l+  +L+++ +Eal++n+++ l +l+d++  + +    r+++L+++k l+P+++v+v++++d+++ sF  r++ +++y +
  XP_028095382.1 228 skecpnfdYDSLLSQLNRLTLNLRDDEALVINCQHWLRYLPDDKKGSVHgdsWRNAFLETIKVLNPRIIVMVDEDSDLGTMSFTSRITTCFNYLW 322
                     7666655555556666777779999****************9977665555599***************************************** PP

            GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
                       fd+le+ lp++s +r  +E+  +g +i+n++  eg +r+er e+  + ++r+++ G++++p+ e++  ++++ll++++  g+ ++++++ lvl
  XP_028095382.1 323 IPFDALETFLPKDSGQRLDYEAD-IGHKIENIIGFEGIQRIERLESGINLSQRMKNKGYSSLPFCEETIGEVNSLLEEHA-SGWGMKKDDDMLVL 415
                     ***********************.********************************************************.899*********** PP

            GRAS 361 gWkdrpLvsvSaW 373
                     +Wk+++ v +SaW
  XP_028095382.1 416 TWKGHNSVYASAW 428
                     ************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MRAELRDNNT PISFQNPNLF PQSSLSGALK GCLGNLDGAC IEKLLLHCAS ALESNDATLV  60
QQVMWVLNNV ASTVGDPNQR LTSWFSRALI AKASRVFPTA MNFNGSSTVH RRMMSVIELA  120
GYVDLIPWHR FGFCASNSAI FIAIQGCSKV HVLDFSITHC MQWPTLIDAL AKRPEGPPSL  180
RISVPYWRPQ VPPFLNVSME EVGLRLANFA KLIDLPFEFN VIEDLSSSKE CPNFDYDSLL  240
SQLNRLTLNL RDDEALVINC QHWLRYLPDD KKGSVHGDSW RNAFLETIKV LNPRIIVMVD  300
EDSDLGTMSF TSRITTCFNY LWIPFDALET FLPKDSGQRL DYEADIGHKI ENIIGFEGIQ  360
RIERLESGIN LSQRMKNKGY SSLPFCEETI GEVNSLLEEH ASGWGMKKDD DMLVLTWKGH  420
NSVYASAWVP CGFED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-117GRAS family protein