PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095385.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 324aa    MW: 36453.6 Da    PI: 7.2039
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.6e-08194235955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      r+RR+ri ++   L++llP++     kK++ a++Le+A +Y+k Lq
  XP_028095385.1 194 ARQRRQRISEKTRCLQKLLPWD-----KKMDMATMLEEAYKYVKFLQ 235
                     59*******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MERGGYQAML MGGEEGSDSG PYSPPSFITD DSSINAFFSA MDPPHSFLHS LHYAYGPFPP  60
TPSSLVSPPT SGFLTHQDII ARQTEEEVSP DRKLKMPKIE ASNLNVEVTD NDVSTEPFNF  120
LSKTSDSVSR LCDLRFQQLP DLRSLEQVHH CFGFAESSSR KRTLESTARN FQFGLNLPEI  180
HSPATVVMPQ STLARQRRQR ISEKTRCLQK LLPWDKKMDM ATMLEEAYKY VKFLQAQISV  240
LQSMPCNSSS FEAQNHGNVN VIGGMGRLNR QQLLQVVVNS PVVQTILYSR GCCVYSMEQL  300
VLMKKIAERK AIYQQMVFDP STLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.13e-29bHLH family protein