PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095423.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 444aa MW: 51298.1 Da PI: 8.6994

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.6	1.5e-16	32	125	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GF++rks+ +++ ++g++++r + Cs+e +r + + +ek+r ++a t++gCka++++ + gk++vt++ +Hn ela XP_028095423.1 32 FYNAYAKAKGFRIRKSRFNTN-KEGKVVSRLWLCSRESQRLPIYLDrvAEKSRAPKALTKVGCKAQFRIWYDAdageGGKYVVTHFIADHNQELA 125 ***************9999.666699999*****99877766899999***********8876666689**********9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MVDDAHGNDM VGDVERAILE QKFDSVEDGE TFYNAYAKAK GFRIRKSRFN TNKEGKVVSR 60 LWLCSRESQR LPIYLDRVAE KSRAPKALTK VGCKAQFRIW YDADAGEGGK YVVTHFIADH 120 NQELAEQHCV MYPRSHHSLN SADKAQAMAM RNVGVKISQI MDYMVNQSGS YENVGFVRTD 180 LHNYIQAERR AEVEDGDAQA NETIKTYTWV LETFMEVMGN KTPVSVLTDE DKAMQEAIRR 240 VFPDARHRLC NWHLGKNAVS NVHISGFGYA FKQCMDMKMD ETKFEHGWTT IVKKFGLQTN 300 SWVLETYEKR HMWAKAYMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVKHYDRAL 360 ARIRWTRAAS KDGQQWPQPS IDSTTTQTAR YGILCSSYNE MCFYASQSTE GFKEARDACL 420 PMTTRMKELY ERNLNDGNGD KGKH

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MVDDAHGNDM VGDVERAILE QKFDSVEDGE TFYNAYAKAK GFRIRKSRFN TNKEGKVVSR  60
LWLCSRESQR LPIYLDRVAE KSRAPKALTK VGCKAQFRIW YDADAGEGGK YVVTHFIADH  120
NQELAEQHCV MYPRSHHSLN SADKAQAMAM RNVGVKISQI MDYMVNQSGS YENVGFVRTD  180
LHNYIQAERR AEVEDGDAQA NETIKTYTWV LETFMEVMGN KTPVSVLTDE DKAMQEAIRR  240
VFPDARHRLC NWHLGKNAVS NVHISGFGYA FKQCMDMKMD ETKFEHGWTT IVKKFGLQTN  300
SWVLETYEKR HMWAKAYMRG HFFAGMKSTQ RSECMNAYFN PFLQHKLKLY EFVKHYDRAL  360
ARIRWTRAAS KDGQQWPQPS IDSTTTQTAR YGILCSSYNE MCFYASQSTE GFKEARDACL  420
PMTTRMKELY ERNLNDGNGD KGKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	9e-33	FAR1 family protein