PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095467.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 990aa MW: 109250 Da PI: 9.1459

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095467.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	52	106	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LH+rFv+av+qLGG+ kAtPk+il++m+vkgLtl h+kSHLQkYRl XP_028095467.1 52 KPRLRWTADLHDRFVDAVTQLGGPTKATPKAILRTMGVKGLTLFHLKSHLQKYRL 106 79****************************************************8 PP
2	Myb_DNA-binding	63.9	3.1e-20	54	105	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav+qlGg+ t+k+I rtmg kg+tl ++ks++qky+ XP_028095467.1 54 RLRWTADLHDRFVDAVTQLGGPtkaTPKAILRTMGvKGLTLFHLKSHLQKYR 105 89*************************************************7 PP
3	G2-like	105.7	2.6e-33	701	755	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl XP_028095467.1 701 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 755 79****************************************************8 PP
4	Myb_DNA-binding	61.4	1.9e-19	703	754	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ XP_028095467.1 703 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 754 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 990 aa Download sequence
MFPRLIQTHH EVIVSSQQQQ QQEEEEEEED INININIHHK GDPCLVLTSD PKPRLRWTAD 60 LHDRFVDAVT QLGGPTKATP KAILRTMGVK GLTLFHLKSH LQKYRLGKQS GKDLGEAPKD 120 GISASYPLES PHASNSSPSL PTTDMNEGYE VKEALRAQME IQSKLHLQVE AEKHLQIRQD 180 AERRYMAMLE RACKMLANQI IGDANTEEDK QNYQELGTEA PAASSSHGPL GLHSLQVPPG 240 IHPHRADCST ESCLTSHESP AGLPLKGSPP GGKKRMLNID STAASLIWAD SDMRAQDVKV 300 IQVNSHGITG YGIGIAKVRA GNRVCKGFVT IPPIFPNINS LTITHRPFYT FSENGTSTYD 360 SFPKMRAFPP FRPILQRSIF KGLFEEIPGN VIISFFQINF KNHTLFLILL VSQSMDDFLG 420 NDNIVTSASA RDKAALIRSH NIVQKGSNPV HNDFRNNFVG HIAKTDWSKL FNILEIVNFG 480 DQSNKSSVNL SWDMVASKTV SHKVTHRGTN NGLVRMIKNS LKPIPPRGLK SINILHRPPN 540 LLIRNTLSKN KVFLLGHLAK RQFIPVIKRS SRRIAKKINK IIGNQVLKLV RLINPIPSIS 600 HEHLNLSLFP FGNSGKVEEF SIPLTLDPIQ DYGDYENSLK PGIFGCLQSS QQMYQPKGVS 660 SSSLVCNNSA AVHSQQLDCG ASTMDPMNGG NGLNNPSLAS KQRLRWTHEL HERFVDAVAQ 720 LGGPDRATPK GVLRVMGVQG LTIYHVKSHL QKYRLAKYLP DSSSDGQKVD KKESGDMLSS 780 MDGSSGMQIT EALKLQMEVQ KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQRLSGVLSE 840 VPGSGVSAPA SGDNCPESDN KTDPATPAPT SESPLLDKVT KERAPAKSLS VDESFSSHHE 900 PLTPDSGCHG SSPAESPKGE RPVKKQRVIM GAGAYAKPEM VLTHQILESS LSPPYQQPHS 960 VFLAREQFDH SSGISIGNED QLENVSGSNL

Sequence ? help Back to Top

Protein Sequence Length: 990 aa Download sequence

MFPRLIQTHH EVIVSSQQQQ QQEEEEEEED INININIHHK GDPCLVLTSD PKPRLRWTAD  60
LHDRFVDAVT QLGGPTKATP KAILRTMGVK GLTLFHLKSH LQKYRLGKQS GKDLGEAPKD  120
GISASYPLES PHASNSSPSL PTTDMNEGYE VKEALRAQME IQSKLHLQVE AEKHLQIRQD  180
AERRYMAMLE RACKMLANQI IGDANTEEDK QNYQELGTEA PAASSSHGPL GLHSLQVPPG  240
IHPHRADCST ESCLTSHESP AGLPLKGSPP GGKKRMLNID STAASLIWAD SDMRAQDVKV  300
IQVNSHGITG YGIGIAKVRA GNRVCKGFVT IPPIFPNINS LTITHRPFYT FSENGTSTYD  360
SFPKMRAFPP FRPILQRSIF KGLFEEIPGN VIISFFQINF KNHTLFLILL VSQSMDDFLG  420
NDNIVTSASA RDKAALIRSH NIVQKGSNPV HNDFRNNFVG HIAKTDWSKL FNILEIVNFG  480
DQSNKSSVNL SWDMVASKTV SHKVTHRGTN NGLVRMIKNS LKPIPPRGLK SINILHRPPN  540
LLIRNTLSKN KVFLLGHLAK RQFIPVIKRS SRRIAKKINK IIGNQVLKLV RLINPIPSIS  600
HEHLNLSLFP FGNSGKVEEF SIPLTLDPIQ DYGDYENSLK PGIFGCLQSS QQMYQPKGVS  660
SSSLVCNNSA AVHSQQLDCG ASTMDPMNGG NGLNNPSLAS KQRLRWTHEL HERFVDAVAQ  720
LGGPDRATPK GVLRVMGVQG LTIYHVKSHL QKYRLAKYLP DSSSDGQKVD KKESGDMLSS  780
MDGSSGMQIT EALKLQMEVQ KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQRLSGVLSE  840
VPGSGVSAPA SGDNCPESDN KTDPATPAPT SESPLLDKVT KERAPAKSLS VDESFSSHHE  900
PLTPDSGCHG SSPAESPKGE RPVKKQRVIM GAGAYAKPEM VLTHQILESS LSPPYQQPHS  960
VFLAREQFDH SSGISIGNED QLENVSGSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-107	G2-like family protein