PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095498.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 130aa    MW: 14566.9 Da    PI: 10.6634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.1e-05831211255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R+++++   +Lr ++P a       ++ +++L +Av+Y+ksL+
  XP_028095498.1  83 KREKMRKMVKTLRGIVPGA-----NQMNTVAVLDEAVRYLKSLK 121
                     4899**************8.....58***************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
METLKHSPIR IAVKSLSLRE RFIFLFPINN SAMALDERER ERSGCGNYES DSSDSCSSYG  60
SKPKKSRLPS LQKSAGSCNS ERKREKMRKM VKTLRGIVPG ANQMNTVAVL DEAVRYLKSL  120
KVEVRKIGVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.14e-13bHLH family protein