PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095547.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 339aa    MW: 37066.8 Da    PI: 9.254
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.2e-1398142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r + + Rt+ q+ s+ qky
   XP_028095547.1  98 PWTEEEHRLFLLGLQKLGKGDWRGISRNFVTSRTPTQVASHAQKY 142
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGRRCSHCSH KGHNSRTCPW RGGGGCVKLF GVRLTDGSII KKSASMGNLS AHYHSSSSAA  60
AASPNPTTSP SEDPIPDPDG YLSDDPAQAT NRRKKGVPWT EEEHRLFLLG LQKLGKGDWR  120
GISRNFVTSR TPTQVASHAQ KYFIRHSNAT RRKRRSSLFD MVPEMGTDPP TVPEEQFMLP  180
PSRAVDTDPF HSLPLLNLSL NRDFEHMEAT SDEKVKGHKE TAMASNAGAS AFFPAHLPVP  240
FPLWPSNTAP LEEESAVEMS RHQVLRPIPL LPKEPVNVDE LVGMSQLSLG ETESRGIESS  300
TLCLNLFLGA PSRRSAFHAS APVNRSYVSK GKSNAIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.13e-77MYB_related family protein