PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095631.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 565aa MW: 65854.8 Da PI: 9.1848

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	6.1e-21	11	100	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+YAk vGFs+rk + + + +++ +r++vCs++g+r++++ + +++r tra tr+gC+a++ ++ + gk+ vt+++ eHn +la XP_028095631.1 11 DFYNQYAKVVGFSIRKGTRTMQ--ATKVLSRKWVCSRQGQRAKQHLArIDRKRATRALTRVGCDAHFGIRYNLdVGKYIVTHFNMEHNQPLA 100 6**************87666..7779**********999885789999*************9989***********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence
MQFNSEEDAN DFYNQYAKVV GFSIRKGTRT MQATKVLSRK WVCSRQGQRA KQHLARIDRK 60 RATRALTRVG CDAHFGIRYN LDVGKYIVTH FNMEHNQPLA TSPCVPFLRS HRFVKIPDKA 120 QVRTLHDVGV KTSQIMDLLV QQSGSFANVG FIHKDLHNYI QAERKVEMKD GDVECALAYL 180 CAKADADPYF FYKYDKDQEN RLDKLFWADS RSRLDYAAFG DVLVFDTTYK TNAYNKPFVI 240 FAGVNNHFET TIFACSLLVD ETIATYTWVL QKLLKAMDNK GPVSVLTDGD MAMREAIQKV 300 FPSAKHRLCN WHMHRNAKRN VRVDRFEGHF KHLMDLDANE VVFEEAWSKM VRNYGLQNNK 360 WVSDTYNNKG MWAQSYLRGH FFAGMKSSQR CEGMHAFFNE CLKRKLKLFE FVRCFDMALY 420 QLRNKEADAE AKTDNSDPCL TIALQPLEKH AATIFTRRLF LMFRNEIIEE ALLIFDGRKE 480 EFDHHIYKFS KCTEFGSTWE VSYHPATSIM KCSCKKFEFF GLPCSHMISV MKCEHMTEIP 540 PGCVMHRWTK QARKDLKRLG MHFSL

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence

MQFNSEEDAN DFYNQYAKVV GFSIRKGTRT MQATKVLSRK WVCSRQGQRA KQHLARIDRK  60
RATRALTRVG CDAHFGIRYN LDVGKYIVTH FNMEHNQPLA TSPCVPFLRS HRFVKIPDKA  120
QVRTLHDVGV KTSQIMDLLV QQSGSFANVG FIHKDLHNYI QAERKVEMKD GDVECALAYL  180
CAKADADPYF FYKYDKDQEN RLDKLFWADS RSRLDYAAFG DVLVFDTTYK TNAYNKPFVI  240
FAGVNNHFET TIFACSLLVD ETIATYTWVL QKLLKAMDNK GPVSVLTDGD MAMREAIQKV  300
FPSAKHRLCN WHMHRNAKRN VRVDRFEGHF KHLMDLDANE VVFEEAWSKM VRNYGLQNNK  360
WVSDTYNNKG MWAQSYLRGH FFAGMKSSQR CEGMHAFFNE CLKRKLKLFE FVRCFDMALY  420
QLRNKEADAE AKTDNSDPCL TIALQPLEKH AATIFTRRLF LMFRNEIIEE ALLIFDGRKE  480
EFDHHIYKFS KCTEFGSTWE VSYHPATSIM KCSCKKFEFF GLPCSHMISV MKCEHMTEIP  540
PGCVMHRWTK QARKDLKRLG MHFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-109	FAR1 family protein