PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095641.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 104aa    MW: 11891 Da    PI: 9.5073
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095641.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.2e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+ rqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl eys+
  XP_028095641.1  9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLSEYST 59
                    79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MGRGRVQLKR IENKISRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLSEYSTD  60
ASSREFLWCK GLEMKVCLLQ FFMVSCNVDG QLADLVWFCF RFGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.15e-35MIKC_MADS family protein