PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095908.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 185aa    MW: 21241.1 Da    PI: 8.4471
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095908.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.53.8e-178683090
            FAR1 30 krtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                    +  +vC+keg+r+ +k++   ++++raetrtgC+a+l +k+++ +gk++vt+++++HnH+l+
  XP_028095908.1  8 RGLLVCNKEGFRKVDKRD-PLSKNSRAETRTGCEARLYIKLHEgNGKYVVTDFKEKHNHDLV 68
                    5568***********999.9999*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MTDDGETRGL LVCNKEGFRK VDKRDPLSKN SRAETRTGCE ARLYIKLHEG NGKYVVTDFK  60
EKHNHDLVSP ECAHMLPSQR KISTTQAIQL DLAAQSGLRL GQSFELMGRE AAKLDQKGFT  120
KLDSKNYLRT KRQQSLAYGE VGNVLQYFKE KSLQNPSFFY AFQLDNEEQI TNMFWVDAQM  180
IMDYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-35FAR1 family protein