PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095988.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 827aa MW: 94624.5 Da PI: 7.9228

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.2	1.7e-20	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fv +keg+r ++k++ ++++r+e rtgC+a+l +k ++ +k+ v +++++HnH ++ XP_028095988.1 31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVFNKEGFRGTDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFV 119 6******************9.6677*************999.999**************999899***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MEPNNVENNG GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR 60 LFVFNKEGFR GTDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHNHIFVP 120 TECTHMLPSQ RKISASQATE IDLAEKFGIW LNAAFELMGN EAGGRESLGF TKVDQKYYLR 180 TKRQKSLAYG GMIMDYGQFG DVVTFDTNYK LNSAHRPFAS FVGFNHHRET VIFGAALMYD 240 ETADSFIWLF RRFLEAMSSK APKTIFTDQD AAMAKAIPIV MPNTKHRLCT WHLMQNALRH 300 ANSIFKDKEV RDKEMKSVLS KFMYDIEDED DFTLKWEEML DKYEVRDNHW LKLTFEVKEK 360 WGWPYVRNAW GAGMSSTQLS ESFNAFLKDF IQFNHNLMQF FMHFDRVLCE KRYKELQVEY 420 ALCHKLPRVN IKVEIMEQAA DVYTNKIYEE FQDEYVKSLE VNIEETEICG ESTIYTVLDS 480 DGVKVRKVTV ECDGSLTCNC RKFEIKGILC SHCLKIVREI LKFKEIPSQY ILKRWTKKAR 540 AENVKDRCGH DIKVDVRLHQ TSRFRSLMAI FKAVACRASE SEETYNLMVE KADDLIANIE 600 SMLSAKFNMP FSDTIEHESP PDTCLESFEV DGVVDTNVVQ AKGLKRRECT SKGRRRTKGG 660 LELVLAKKNK TSSHNASQTP MFVAPQPSSH NASQTLMSVA PQPPPLFSAS APEPSSSFSP 720 SIPQSAPLFS ISAPQLPPFS TCVPQVNASS TQFMYPAYDP SFLRHNMHFS MPSMYSVHGS 780 YQALLNNASG YDSQASNSPA YSEVLYGHGR GRGRGQGHGN VDHTSIS

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MEPNNVENNG GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR  60
LFVFNKEGFR GTDKRDPLTK NPRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHNHIFVP  120
TECTHMLPSQ RKISASQATE IDLAEKFGIW LNAAFELMGN EAGGRESLGF TKVDQKYYLR  180
TKRQKSLAYG GMIMDYGQFG DVVTFDTNYK LNSAHRPFAS FVGFNHHRET VIFGAALMYD  240
ETADSFIWLF RRFLEAMSSK APKTIFTDQD AAMAKAIPIV MPNTKHRLCT WHLMQNALRH  300
ANSIFKDKEV RDKEMKSVLS KFMYDIEDED DFTLKWEEML DKYEVRDNHW LKLTFEVKEK  360
WGWPYVRNAW GAGMSSTQLS ESFNAFLKDF IQFNHNLMQF FMHFDRVLCE KRYKELQVEY  420
ALCHKLPRVN IKVEIMEQAA DVYTNKIYEE FQDEYVKSLE VNIEETEICG ESTIYTVLDS  480
DGVKVRKVTV ECDGSLTCNC RKFEIKGILC SHCLKIVREI LKFKEIPSQY ILKRWTKKAR  540
AENVKDRCGH DIKVDVRLHQ TSRFRSLMAI FKAVACRASE SEETYNLMVE KADDLIANIE  600
SMLSAKFNMP FSDTIEHESP PDTCLESFEV DGVVDTNVVQ AKGLKRRECT SKGRRRTKGG  660
LELVLAKKNK TSSHNASQTP MFVAPQPSSH NASQTLMSVA PQPPPLFSAS APEPSSSFSP  720
SIPQSAPLFS ISAPQLPPFS TCVPQVNASS TQFMYPAYDP SFLRHNMHFS MPSMYSVHGS  780
YQALLNNASG YDSQASNSPA YSEVLYGHGR GRGRGQGHGN VDHTSIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-97	FAR1 family protein