PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028095989.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 216aa    MW: 24999.4 Da    PI: 9.1684
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028095989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.51.1e-2331119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+r  +k++   ++++r+e r+gC+a+l +k ++  +k+ v++++++HnH ++
  XP_028095989.1  31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGIDKRD-PLTKNPRQEVRIGCQARLIIKWDRnIHKFFVDEFVEQHNHIFV 119
                     6********************9.6677*****************999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEPNNVENDG GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFR GIDKRDPLTK NPRQEVRIGC QARLIIKWDR NIHKFFVDEF VEQHNHIFVP  120
TKCTHMLPSQ RKVSASQATE IDLAEKSGIQ FNAAFELMGN EVGGRESLGF TKVDQKNYLR  180
TKRQKCLAYG EAGSILQYFR EKTLENPSFF LLGPIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-35FAR1 family protein