PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096029.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ARF
Protein Properties Length: 1014aa    MW: 111439 Da    PI: 7.178
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B368.96.9e-22137238199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae++       ++++++  +l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   +++
  XP_028096029.1 137 FCKTLTASDTSTHGGFSVPRRAAEKIfpaldftMQPPAQ--ELQSRDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDE 227
                     99*****************************96555544..8************************************************..568 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     +++l+++++r+
  XP_028096029.1 228 KQQLLLGIRRA 238
                     8889****997 PP
2Auxin_resp119.72.3e-39263346183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+v+YnPras+seFvv+++k+ ka+  +++s+GmRf+m+fete+s +rr++Gt++g+sdldpvrW+nS+Wr+L+
  XP_028096029.1 263 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVCsNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQ 346
                     79******************************998669********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1014 aa     Download sequence    
MKMPANGAGS CPPATASGNS SEGSGEKKSI NPELWQACAG PLVNLPAAGT HVVYFPQGHS  60
EQVAASMKKG VDSQIPNYPN LPSKLLCLLH NVTLHADLET DEVYAQMTLQ PVPSFDKDAL  120
LRSDLSMKAN KPQTEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFTM QPPAQELQSR  180
DLHDNVWTFR HIYRGQPKRH LLTTGWSLFV SGKRLFAGDS VLFIRDEKQQ LLLGIRRANR  240
QPTNLSSSVL SSDSMHIGIL AAAAHAAANN SPFTVFYNPR ASPSEFVVPL AKYYKAVCSN  300
QISLGMRFRM MFETEESGTR RYMGTITGIS DLDPVRWKNS QWRNLQVGWD ESTAGERRNR  360
VSIWEIEPVT APFFICPTPP FFGSKRPRQL GMPGNGYDES CGLENLFKRT MPWLGDDMYM  420
KDPQSLPGLS LVQWMNMQQN PSLGNSLQPN YLHSLSGSVL QNLAGADLTR QLGGLPSPQI  480
PQQNNLQFNT QKPTQQTQLD QLQKLPAAAT LNPLGSIIQQ QQQQQQQFVD ITQPPNQNLP  540
STQVQAQLLQ SQALGQTQNI LQQQPSIQNH QLHRNLSQNL QLQQQIIGQN QQQNLMPSQL  600
PDQVNQQLQM SENQIQFQLL QNLHQQQQAI LAQQQSTLQQ PPQLPQVQDQ QRQLLDASQS  660
FSRAATPSQM VDMPQATAIA TSLPPQSHLI PQQMSKTNNS QPNIRFSHPP QQQPKLQQHQ  720
QPGVLPELPG HLGHTPTSNQ LSTTGSSLLT GAAGGGQSGL TDDVPSCSTS PSTNNCPGLV  780
QPIMNGRAQR SMAIGEEMTQ SSATLLSSSG LETMSANANL VKDLQLKPDF KPSLNISKSQ  840
NQGFLAPQTY LNAAGTQMDY LDTSSSATSV CLSQNDVHLQ QNIPLSFNQQ SLLFRDTSQD  900
GEVQGDPRSS VRFGANTDSQ LGMPMIPDPL LTKGMVGSEK DFSNNLSSGG GLLSTYENPK  960
DTQPELSSSM VSQSFGVPDM TFNSLDSTIN DSSFLSRGAW APPSQFQRMR TYTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein