PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096490.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HD-ZIP
Protein Properties Length: 270aa    MW: 30655.3 Da    PI: 6.3177
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.6e-1889140656
                     S--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++  eq+++Le+ F++  ++++ e++ +LA+ l+L+ rqV +WFqNrRa++k
  XP_028096490.1  89 RLGMEQVKALEKSFHElGNKLDPERKLQLARALNLQPRQVAIWFQNRRARWK 140
                     56789***********9**********************************9 PP
2HD-ZIP_I/II123.41.1e-3985176191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekk+rl  eqvk+LE+sF+e   kL+perK +lar+L+lqprqva+WFqnrRAR+ktkqlEkdy+ Lkr++++lk++n +L++++++L++el
  XP_028096490.1  85 EKKKRLGMEQVKALEKSFHELGnKLDPERKLQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDLLKREFESLKADNGALKSHNNKLHAEL 176
                     69****************88544******************************************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MICDCDGNGM AFASPHEFMF QTHELNHPPS ILPSCPPQDF HGAQTRRSMS FSGIGGKWDH  60
QEMQVEDDMS DDDDGGSNSQ VVLGEKKKRL GMEQVKALEK SFHELGNKLD PERKLQLARA  120
LNLQPRQVAI WFQNRRARWK TKQLEKDYDL LKREFESLKA DNGALKSHNN KLHAELLALK  180
GIESNGIGPI NLNKEIEGSI ESSLDTYKHI FHSSTGATSS VTHLLQSSSR SDLQCRKIDQ  240
TVPDESFCNM FSSIEDQPSF WPWPEQQHIH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135143RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.18e-61HD-ZIP family protein