PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096491.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 169aa    MW: 18844.5 Da    PI: 8.3123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.24.5e-06961351554
                     HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     +i +  ++L++llP+ + + ++ K+s   +L+++++YI++L
  XP_028096491.1  96 QIVDLVSKLQQLLPEiR-NRRANKVSAPKVLQETCNYIRNL 135
                     6667789********66.67777788888**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MYSLFLSSPS PLSLFSSCGP SSLYFSLLII IFSCHSISNT SSSFFLQASE DSFLSILNYI  60
GSIFDTAKYS LYCKQTMSSR RSRQSSGGTS RITDDQIVDL VSKLQQLLPE IRNRRANKVS  120
APKVLQETCN YIRNLHKEVD DLSDRLSQLL ATIDANSPEA AIIRSLIIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.11e-37bHLH family protein