PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096656.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 299aa    MW: 33166.8 Da    PI: 8.1363
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.82.3e-3272129260
     ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                     + vrYkeClkNhAas+Gg a+DGCgEfmp+ geegt +al+C+AC+CHRnFHR+eve e
  XP_028096656.1  72 KMVRYKECLKNHAASMGGSATDGCGEFMPN-GEEGTLEALTCSACNCHRNFHRKEVEGE 129
                     679**************************8.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MELSSEDGEI PIPIPIPINS SYGVGHMIHH DPAPRNHIIP TSLATQNNQM SSNGPPIPTI  60
TLVEDHHVPY KKMVRYKECL KNHAASMGGS ATDGCGEFMP NGEEGTLEAL TCSACNCHRN  120
FHRKEVEGEQ HPSSCEGYHT PPHLNRVGGR RVILSHHHKN FLGPEALGYP TATFIPSGPA  180
PPPAAHHQML MSYNMGSLLP SESDEQEDGV GGGGGVVLRP PHHQMVKKRF RTKFTQEQKE  240
KMLNFAEKVG WKIQKQEEAV VQQLCQEIGI KRRVLKVWMH NNKHNLAKKN PSSTLQIPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.14e-73ZF-HD family protein