PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096669.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family LFY
Protein Properties Length: 397aa    MW: 44041.6 Da    PI: 8.0652
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY653.13.8e-19913771384
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseap.leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmksls 94 
                     mdp+afsaslfkwdpraa+ +pp+rll   a +++p   aa a+  r+l +le+lf+ayG+ry+t+akiaelGftv+tL+dmk+eeldd+m+sls
  XP_028096669.1   1 MDPDAFSASLFKWDPRAAVPPPPTRLLDAVAPPPPPpPVAAYAVRPRELGGLEDLFQAYGIRYYTAAKIAELGFTVNTLMDMKEEELDDMMNSLS 95 
                     9****************999999999888776666623333444555688********************************************* PP

         FLO_LFY  95 eifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglg....eaelvaaeekkseeek 185
                     +ifr+dllvGeryGikaavraerrrl+ee+  ++rr++ls+d+++a dalsqeglseepvq+ekea+gsgg+g g     +e+vaa+     ++k
  XP_028096669.1  96 QIFRWDLLVGERYGIKAAVRAERRRLDEED--TRRRHFLSADTTNAHDALSQEGLSEEPVQQEKEAVGSGGGGGGggggMWEVVAAA---CGKKK 185
                     ****************************88..89999********************************665544000044444443...33444 PP

         FLO_LFY 186 kkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtk 280
                     k++ +++++rkk + ++++       e+d+ ++++g ++++rqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtk
  XP_028096669.1 186 KQQ-QQQRRRKKGEGRMTS------LEDDDGSDDGGGGSDQRQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTK 273
                     444.323333333322222......2222233344555679****************************************************** PP

         FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLr 375
                     vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaa+qgwdida+fnahprL+iWYvPtkLr
  XP_028096669.1 274 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAAQQGWDIDAIFNAHPRLAIWYVPTKLR 368
                     *********************************************************************************************** PP

         FLO_LFY 376 qLChlersk 384
                     qLCh+ers+
  XP_028096669.1 369 QLCHAERSN 377
                     *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MDPDAFSASL FKWDPRAAVP PPPTRLLDAV APPPPPPPVA AYAVRPRELG GLEDLFQAYG  60
IRYYTAAKIA ELGFTVNTLM DMKEEELDDM MNSLSQIFRW DLLVGERYGI KAAVRAERRR  120
LDEEDTRRRH FLSADTTNAH DALSQEGLSE EPVQQEKEAV GSGGGGGGGG GGMWEVVAAA  180
CGKKKKQQQQ QRRRKKGEGR MTSLEDDDGS DDGGGGSDQR QREHPFIVTE PGEVARGKKN  240
GLDYLFHLYE QCREFLIQVQ NIAKERGEKC PTKVTNQVFR YAKKAGASYI NKPKMRHYVH  300
CYALHCLDEE ASNALRRAFK ERGENVGAWR QACYKPLVAI AAQQGWDIDA IFNAHPRLAI  360
WYVPTKLRQL CHAERSNVGG GGGSSSVSGG RAEHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183194KKKKQQQQQRRR
2184195KKKKQQQQQRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-141LFY family protein