PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096788.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 283aa    MW: 30461.2 Da    PI: 10.0589
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.63.4e-14105149347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qky
   XP_028096788.1 105 PWTEEEHRTFLSGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKY 149
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTA YRATVVGGLR LFGVQLDLSS SSSSSIAMMK KSISMDCLSS  60
SSSPSPSSSL SSSRVSIHEN SDKSSIGYLS DGLLGHSQER KKGVPWTEEE HRTFLSGLEK  120
LGKGDWRGIS RNYVTTRTPT QVASHAQKYF LRQASLNKKK RRSSLFDMVS SSNNSDSKPS  180
DAILAQCLSM KSSYHEAQHH LTTLPLISHN IQETDCSQSS PGWLFGSPNS QLKSSAAATI  240
QTKPINSANS APDLELKLAA PRPTDQTKSS SSSPLLIGPI SVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.13e-54MYB_related family protein