PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096797.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 223aa    MW: 24706.8 Da    PI: 6.7281
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.000114189254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r  ++erE+  R+++N+ f  L   l ++    ++ + Ka+iL ++++ +k++
  XP_028096797.1 41 RIHKSEREKMKREHLNELFIALANALGPL----QQNNGKASILGETTRLLKEM 89
                    56789***********************8....68899999**9999998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MSMDSEAPAA PVVDKVSQLA ETSANGRSHP SKKNQGKVPV RIHKSEREKM KREHLNELFI  60
ALANALGPLQ QNNGKASILG ETTRLLKEMH AQIEGLRREN AALLSESQYV SIEKNELHDE  120
NSALESQIVK LRIELQERVV HSKPDLNVPP PEESSHFSLE QPALQQAPPY GSPFYVIPVC  180
SDPQAYSEQD TTQPALKPTT NVSKPHARYP TPSDSWPAQL LGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.21e-54bHLH family protein