PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096806.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 270aa    MW: 30505.2 Da    PI: 7.4988
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-164186148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     r ++T+ E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
   XP_028096806.1 41 RCKMTPHEERLVLELHNKWGNR-WSRIARKLP-GRTDNEIKNYWRTHM 86
                     6689******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGLHSQSFRF EGGGRQIYGL KRTGKSCRLR WVNYLHPGLK RCKMTPHEER LVLELHNKWG  60
NRWSRIARKL PGRTDNEIKN YWRTHMRKKA QERKRATSPI SSVSNCSSAS SNAPVDSTPV  120
VETKERSFYD TGGVVFAPSS ISTSKSSSAS LSNNPPMDSM VTVAETKEIS FFDTGGLEMS  180
VPKGKKDQEE YSMDDIWKDI AMSENETIKS YHDGYGEEGC NFFGQTMTSP VWNYAPDLAW  240
MMEEEESKLF PAISDQIFGC YEQASSDLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.42e-64MYB_related family protein