PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028096884.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 902aa MW: 102627 Da PI: 7.1397

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028096884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.5	3.3e-16	66	139	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY+eYA++vGF++r+ + + s+ +g++ +f C +eg +++++++ C+a+lk+++++ +kw v+k+++eH+H+ XP_028096884.1 66 FYDEYARRVGFNTRIGQCNCSELDGKTNAIEFLCAREGLKKKNSES--------------CNAMLKIERKDPDKWLVIKFVKEHSHST 139 9*************************************998877..............************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 902 aa Download sequence
MDVETINVEN VGRYVEVDEG DAEINEQLVA GSDNCVENLL LTQEEVGIDE PHLGMEFESE 60 DAAKTFYDEY ARRVGFNTRI GQCNCSELDG KTNAIEFLCA REGLKKKNSE SCNAMLKIER 120 KDPDKWLVIK FVKEHSHSTV TPSKVHYLRP RRPFAGAAKT MDQSYSEEGD HSYSKARASS 180 NVSTHASMDG SHLLVEQNRA NPRAKTLVPR RTQKKKALGD AQNLLDYFKK MQAEHPGFYY 240 AVQLDSSNCL TNVFWSDARS RTAYSHFGDA VTFDTTYIIN NYVVPFVSFT GVNHHGQMVL 300 FGCGLVVDEL ESSYLWLFRT WLAAMNDRPP LAITTDQDKL IQSAVSKVFH SARHRICKWH 360 ILREGQRRLA RVCNTHPTFQ GDLYNCINMT ETIEEFESSW SSIIDKYHLM KNDWLQGLYN 420 ARKHWAPVYF RDTFFASFPS DQGSEAAHSF FDGYVDQETT LPLFFRQYER ALEQSFKKEI 480 EADFDTIRST PVLKTPSPME KQAANLYTRR IFMKFQDELV ETFAYTANRE RGDGSFGTFR 540 VAKFEDQQKA YMVSLNIPEM RASCSCQMFV YSGILCRHVL TVFTVTNVLT LPPHYIVKRW 600 TRHAKNGAGS DDKGIEVEAS ESLTSRYNIL CREAMRYAEE GAISVETYNA AMNAIREGGK 660 KVAVTMKNVA RVTPKLQVCG SQEDGNKEIH VQTTDMTPLL WPQLEKVKPL PPWYGSDLNR 720 VPWRSHQDEA AHNFNNNSFG AHTPTPQKSL PFMAPLSLQQ DDGPPDNTVV LPCLRSMTWF 780 MENKNLRPAK RIAVINFKLQ DNSKGPSGET EVKFQLSKVT LEPMLKSMTY IGQQLATPAN 840 QVAVINLKLQ DSEAISGEKE VKFQVSRDTL GAMLRSMAYI REQLLNNQAE PQLQPSLKKP 900 RQ

Sequence ? help Back to Top

Protein Sequence Length: 902 aa Download sequence

MDVETINVEN VGRYVEVDEG DAEINEQLVA GSDNCVENLL LTQEEVGIDE PHLGMEFESE  60
DAAKTFYDEY ARRVGFNTRI GQCNCSELDG KTNAIEFLCA REGLKKKNSE SCNAMLKIER  120
KDPDKWLVIK FVKEHSHSTV TPSKVHYLRP RRPFAGAAKT MDQSYSEEGD HSYSKARASS  180
NVSTHASMDG SHLLVEQNRA NPRAKTLVPR RTQKKKALGD AQNLLDYFKK MQAEHPGFYY  240
AVQLDSSNCL TNVFWSDARS RTAYSHFGDA VTFDTTYIIN NYVVPFVSFT GVNHHGQMVL  300
FGCGLVVDEL ESSYLWLFRT WLAAMNDRPP LAITTDQDKL IQSAVSKVFH SARHRICKWH  360
ILREGQRRLA RVCNTHPTFQ GDLYNCINMT ETIEEFESSW SSIIDKYHLM KNDWLQGLYN  420
ARKHWAPVYF RDTFFASFPS DQGSEAAHSF FDGYVDQETT LPLFFRQYER ALEQSFKKEI  480
EADFDTIRST PVLKTPSPME KQAANLYTRR IFMKFQDELV ETFAYTANRE RGDGSFGTFR  540
VAKFEDQQKA YMVSLNIPEM RASCSCQMFV YSGILCRHVL TVFTVTNVLT LPPHYIVKRW  600
TRHAKNGAGS DDKGIEVEAS ESLTSRYNIL CREAMRYAEE GAISVETYNA AMNAIREGGK  660
KVAVTMKNVA RVTPKLQVCG SQEDGNKEIH VQTTDMTPLL WPQLEKVKPL PPWYGSDLNR  720
VPWRSHQDEA AHNFNNNSFG AHTPTPQKSL PFMAPLSLQQ DDGPPDNTVV LPCLRSMTWF  780
MENKNLRPAK RIAVINFKLQ DNSKGPSGET EVKFQLSKVT LEPMLKSMTY IGQQLATPAN  840
QVAVINLKLQ DSEAISGEKE VKFQVSRDTL GAMLRSMAYI REQLLNNQAE PQLQPSLKKP  900
RQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	216	RRTQKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein