PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028096986.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MIKC_MADS

Protein Properties

Length: 110aa MW: 12563.5 Da PI: 10.6783

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028096986.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.7	7.3e-29	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +ri+n snrqvtfskR+ng+ KKA ELSvLCd+eva+iifss+gkl+e+ XP_028096986.1 9 ERIKNMSNRQVTFSKRKNGLAKKALELSVLCDVEVALIIFSSHGKLHEFG 58 69**********************************************95 PP
2	K-box	14.8	1.2e-06	78	108	8	38
K-box 8 sleeakaeslqqelakLkkeienLqreqRhl 38 +++++++esl+ el+kLk+ e+Lq++qR l XP_028096986.1 78 AKTTTEQESLYLELTKLKATCESLQHSQRSL 108 35778899*********************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence
MGRGKVVLER IKNMSNRQVT FSKRKNGLAK KALELSVLCD VEVALIIFSS HGKLHEFGSS 60 SVRQTIQRYR RCRCTSQAKT TTEQESLYLE LTKLKATCES LQHSQRSLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	3e-37	MIKC_MADS family protein