PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097077.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 322aa MW: 36444 Da PI: 6.186

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.5	2.3e-23	75	164	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ +vGFs+rks+ +k+k+++eit+r fvC+keg+r +k++ + +++e r+gC a+l +k+++ gk++ ++++++HnH+l+ XP_028097077.1 75 DFYNNYGGKVGFSIRKSYAHKNKQTKEITSRIFVCYKEGTRGIDKRD-PLVKFPTQEVRCGCGARLSIKLDRnLGKYVAIDFVEHHNHDLV 164 6*****************************************999.88899**************989*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MTEVGDCHGN GGSMAEGGDC HGEGRNMAEA RDATARQDCG PEEVMEENNV VDDLGSCGWK 60 PKLGMPFDSE QAAYDFYNNY GGKVGFSIRK SYAHKNKQTK EITSRIFVCY KEGTRGIDKR 120 DPLVKFPTQE VRCGCGARLS IKLDRNLGKY VAIDFVEHHN HDLVRQECVH MLPSQRKIST 180 TQAIEVELAS ESVIPLRSAY ELLGRECGGR ASLGFTKLDQ KNYLRSKRQK DLEYGEAGSV 240 LQYFRKKMVE NPSFYYAVQL DCEEQITNIF WDDAQMIMDY AQFGDVVTFD TTYKINNEHR 300 PFGTFVGFNH HRETVIFGAA LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-58	FAR1 family protein