PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097166.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

bHLH

Protein Properties

Length: 485aa MW: 54586.1 Da PI: 6.8985

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.8	9.1e-14	298	341	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR+ri++++++Lr+l+Pk + K++ a+iL A+eYI +Lq XP_028097166.1 298 VTERKRRNRIKDGLFTLRSLVPKiS------KMDRASILGDAIEYIEDLQ 341 57*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MSALETALHW LRPLVESNTW DYCVVWKLGN DPSRFIQWVG CCCAGACACG GELVNVKEES 60 GDQKHHLFPL CRDCKIKHSA KTKACEKLSH FPSSMALYSG IHGEVVMSTE ARWIRCAKDS 120 NSSDHLHVES TGTELLIPVV NGLIELFSTK HIPKDEKIVD FITSQFNINI KRESVTAQSY 180 STTLNLSKQP HDPLVGEYFN SFIPRLPFLS LVSQPATYPC FEGSSTGSSP SNQHSSFCSG 240 SGHVSPNVSV NESIEKYPPS KKQEELGILG HANHLVEKDS LKSKQRIERE QYQSKNLVTE 300 RKRRNRIKDG LFTLRSLVPK ISKMDRASIL GDAIEYIEDL QKAVKKLQDE LREMEKEKFN 360 EESDELEMPK LNASTEHNQD PSTVDENEQM EEQVEVKQIG MRNFLLKLLC KRKQGGFRGL 420 IEAVNSLGLQ VIDANVTTFN GKVLNILQLE VNKLGVEVQQ KSLRDSLIKL TGNNKTSQEY 480 TMECP

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MSALETALHW LRPLVESNTW DYCVVWKLGN DPSRFIQWVG CCCAGACACG GELVNVKEES  60
GDQKHHLFPL CRDCKIKHSA KTKACEKLSH FPSSMALYSG IHGEVVMSTE ARWIRCAKDS  120
NSSDHLHVES TGTELLIPVV NGLIELFSTK HIPKDEKIVD FITSQFNINI KRESVTAQSY  180
STTLNLSKQP HDPLVGEYFN SFIPRLPFLS LVSQPATYPC FEGSSTGSSP SNQHSSFCSG  240
SGHVSPNVSV NESIEKYPPS KKQEELGILG HANHLVEKDS LKSKQRIERE QYQSKNLVTE  300
RKRRNRIKDG LFTLRSLVPK ISKMDRASIL GDAIEYIEDL QKAVKKLQDE LREMEKEKFN  360
EESDELEMPK LNASTEHNQD PSTVDENEQM EEQVEVKQIG MRNFLLKLLC KRKQGGFRGL  420
IEAVNSLGLQ VIDANVTTFN GKVLNILQLE VNKLGVEVQQ KSLRDSLIKL TGNNKTSQEY  480
TMECP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-35	bHLH family protein