PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097168.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 380aa    MW: 42838.5 Da    PI: 6.8606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.36.5e-14192235755
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       Er+RR+ri++++++Lr+l+Pk +      K++ a+iL  A+eYI +Lq
  XP_028097168.1 192 VTERKRRNRIKDGLFTLRSLVPKiS------KMDRASILGDAIEYIEDLQ 235
                     57*********************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MSTEARWIRC AKDSNSSDHL HVESTGTELL IPVVNGLIEL FSTKHIPKDE KIVDFITSQF  60
NINIKRESVT AQSYSTTLNL SKQPHDPLVG EYFNSFIPRL PFLSLVSQPA TYPCFEGSST  120
GSSPSNQHSS FCSGSGHVSP NVSVNESIEK YPPSKKQEEL GILGHANHLV EKDSLKSKQR  180
IEREQYQSKN LVTERKRRNR IKDGLFTLRS LVPKISKMDR ASILGDAIEY IEDLQKAVKK  240
LQDELREMEK EKFNEESDEL EMPKLNASTE HNQDPSTVDE NEQMEEQVEV KQIGMRNFLL  300
KLLCKRKQGG FRGLIEAVNS LGLQVIDANV TTFNGKVLNI LQLEVNKLGV EVQQKSLRDS  360
LIKLTGHVAS SYSFGGYEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.13e-36bHLH family protein