PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097377.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family M-type_MADS
Protein Properties Length: 250aa    MW: 28717.1 Da    PI: 4.7826
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.68.7e-15949242
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    +i ++  r++t+ kRr+g++KK +ELS+LCd+e+ ++i+ +
  XP_028097377.1  9 FITDNAARKTTLRKRRAGMIKKISELSTLCDIEAGIVIYNP 49
                    799999********************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MTNRVKLAFI TDNAARKTTL RKRRAGMIKK ISELSTLCDI EAGIVIYNPG EVTPTVWPSY  60
EYMKQMFKRF LSMSIIDRSQ KMVTYEGYII QIITKETENN ITEKKNNDKK EIQEIMNQTF  120
EGNDLNELDM TILNLLSLLA DDKLKQLKKK QNWPRGQQMA LLPPPPLSPV LAPEIIEVEE  180
GIRAPTNGED GESSIRMIIQ ELMNDQCFME TTAEHMELLL SKDVEGTSSS KNEEDLPKDL  240
NEVFPHIYFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65300.11e-16M-type_MADS family protein