PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097378.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

E2F/DP

Protein Properties

Length: 228aa MW: 26028.3 Da PI: 8.9556

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	30	8.6e-10	63	102	1	38
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse..d 38 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + XP_028097378.1 63 RKEKSLGLLTQNFVKLFLCSNVDLISLEEAAKILLDDpsM 102 79********************************887541 PP
2	E2F_TDP	52.1	1e-16	167	226	22	71
E2F_TDP 22 egivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 + ++l+e+ak L+ + +++k+RR+YDi+NVL+++n iek ++k+++rw g XP_028097378.1 167 VDLISLEEAAKILLGDahdpsMMRTKVRRLYDIANVLSSMNFIEKthhpeTRKPAFRWLG 226 4789**************999*******************99999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MVPSQNGVRC LMLDMYDFHN DIRLCHSFGG ICFNNTSFVY IGHFRILLFS IYLLAITLEV 60 DNRKEKSLGL LTQNFVKLFL CSNVDLISLE EAAKILLDDP SMMRSNDSSL GYLNILLIEG 120 THHPETRKPA FKWLGTRGKS DNGSANTFVL NESKKRISKK NICKYLVDLI SLEEAAKILL 180 GDAHDPSMMR TKVRRLYDIA NVLSSMNFIE KTHHPETRKP AFRWLGTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.1	5e-27	E2F/DP family protein