PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097449.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 307aa    MW: 34406.1 Da    PI: 10.0998
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.93e-1923117186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrt...sessstcpyfdqle 86 
                     +W+ +e+ aLi+a+r+++ +l+rg+l++ +W+ev++ +      ++++  ++++qC++k+e+l+kry+++ +++   t   ++  s++++f++++
  XP_028097449.1  23 CWSPDETVALIDAYRDKWYSLKRGNLRASHWQEVADDLssrcpiSAGKSPKTSVQCRHKMEKLRKRYRAEIQRALAMTpkgQRFNSSWVHFNRMD 117
                     7******************************************999**********************9999877665222455679*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MVASSSSPQD PPKPPSRRLP PPCWSPDETV ALIDAYRDKW YSLKRGNLRA SHWQEVADDL  60
SSRCPISAGK SPKTSVQCRH KMEKLRKRYR AEIQRALAMT PKGQRFNSSW VHFNRMDLME  120
KGPNSVSVMV DSSSIDEDDD DEEDLYQSVK RGVTENRSVH GSTSNGIGGF RIKIPGRSSV  180
TVVPGTKKSY HNPNPNPNFV STRVVRDGYS ERLGLGKRGG GDGVGMKREG DPVAEMVAAI  240
KGLGDGFVRM ERMKMEMARE FEAMRREMEM KQTEMILESQ ERIVEAFGKA LSEKGNKKAK  300
RMPTPEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.16e-36Trihelix family protein