PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097462.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 229aa MW: 26718.2 Da PI: 6.6233

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.5	6.9e-26	25	114	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++ Fs+r+++ kk+k +++i++r++vC+keg+r+ +k++ ++++raetrtgC+a+l vk++ +gk++v++++++HnHel+ XP_028097462.1 25 DFYNAYGGRMRFSIRREYCKKNKLTKQIISRNLVCNKEGFRKVDKRD-PLTKTPRAETRTGCDARLFVKLDVnSGKFVVIDFKEKHNHELV 114 6*****************************************999.9999***************99**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MEPDNDCGWK PKEGMTFDSE ECAYDFYNAY GGRMRFSIRR EYCKKNKLTK QIISRNLVCN 60 KEGFRKVDKR DPLTKTPRAE TRTGCDARLF VKLDVNSGKF VVIDFKEKHN HELVSLDCAH 120 TLPSQRKISD TQAIELDLAS ESGLRLWQFF ELMDNEEQIT NMFWANAQMV MDYAQFGDVV 180 IFDTTYKLNK EHRPFASFVG FNHHRETVVF GAALLYDETA ETFNVHYKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.3	1e-28	FAR1 family protein