PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097465.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 467aa MW: 54604.1 Da PI: 8.3391

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.8	1e-24	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ ++++++e rtgC+a+l++k ++ ++k+ v++++++HnH ++ XP_028097465.1 31 DFYNSYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDKRD-PLTKNSKQEVRTGCQARLVIKWDRnTKKFFVSDFVEQHNHIFV 119 6******************9.6666************9999.999999***********99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEVY DFYNSYGGRL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFR VVDKRDPLTK NSKQEVRTGC QARLVIKWDR NTKKFFVSDF VEQHNHIFVP 120 TECTHMLPSQ RKISASQATK IDLAEKSGIH LNAVFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYG EVGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGTVLMYDE TADSFIWIFR RFLEAMSSKA 300 LKTIFTNQDA AMAKAMPIVM PNTTHRLCTW HLMQNALRHA NSIIKDKAMK DKGMKSVLYT 360 FMYDIEDEEE FMLKWEEMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE 420 SFNAFLKDFI QSDHNLIQFF MHFDHVLLRR GTKSYKPNML YAKSCQG

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEVY DFYNSYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDKRDPLTK NSKQEVRTGC QARLVIKWDR NTKKFFVSDF VEQHNHIFVP  120
TECTHMLPSQ RKISASQATK IDLAEKSGIH LNAVFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EVGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGTVLMYDE TADSFIWIFR RFLEAMSSKA  300
LKTIFTNQDA AMAKAMPIVM PNTTHRLCTW HLMQNALRHA NSIIKDKAMK DKGMKSVLYT  360
FMYDIEDEEE FMLKWEEMLD KYEVRDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE  420
SFNAFLKDFI QSDHNLIQFF MHFDHVLLRR GTKSYKPNML YAKSCQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein