PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097602.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 727aa MW: 82346.5 Da PI: 5.453

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097602.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48	2.5e-15	535	576	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +i led+ ++ +l++++AAk+L+v+ ++LKr CR yG+kRWP XP_028097602.1 535 KIPLEDILQNSALSLENAAKNLKVSKSTLKRVCRPYGVKRWP 576 7889*************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 727 aa Download sequence
MAEEFFSYLS DDFKEYMFKE LNWLLSKYFY GVVFWSREDD EPQRPSTLPD GDISYLNKII 60 RDLLYTIMYG VYGPPYPVLI QFWAPITTKE GRSFLTTRNQ PFSLTYNPPD MEGFLGYRMI 120 CMDSKFDIDL DGGKTCEQHL PARVFKHQFP ESTPNVEFYS ITEYPQRHDA LRCRVRHSLA 180 FPVFESSTQR CVGVIEVVTP EKDLSCSLYF EYSIYKDFEK FGLKCSVVFD HEAMELDDDK 240 NEAHKVAFDE IKNMLKRVCD VHDVPFAQAW VPCKMGCPCR ALVDGGILHA SCCYKKVDYG 300 EDEDGYDYDE DDYGEYDDFR HVSSLSHSKN GVGVVGRALL STNMVFCRDV TQLSLTEYPL 360 AHYAREAGLS GCFAICLESN CTGNDVYVLE FFMPMSNNAS ENPHTSLRKI LETMKKNLSC 420 FRVASREELG EELHIEEISI QNGEKLDPVQ IPQTTISLPR LELSQSKVAV MQVDSSDQQL 480 VNAINTGSNA GGTEHSNFAI ACTQEKSTVK VSKMKGNKSG GTVKASKREG NNKIKIPLED 540 ILQNSALSLE NAAKNLKVSK STLKRVCRPY GVKRWPPHIN KVGCSQLDES APCVNSDHLP 600 STQSLATIVH TEPYDTTMQD ANIVTIKAKY GEGVTIKFPL SLSSSFLQLQ QEVAKRLDLK 660 AGTYYVKYED EDGELILIGC DEDLQDYMHD SRSLGRSSIV VLLEQKLPIT DHKKEKIKKL 720 LITHRTT

Sequence ? help Back to Top

Protein Sequence Length: 727 aa Download sequence

MAEEFFSYLS DDFKEYMFKE LNWLLSKYFY GVVFWSREDD EPQRPSTLPD GDISYLNKII  60
RDLLYTIMYG VYGPPYPVLI QFWAPITTKE GRSFLTTRNQ PFSLTYNPPD MEGFLGYRMI  120
CMDSKFDIDL DGGKTCEQHL PARVFKHQFP ESTPNVEFYS ITEYPQRHDA LRCRVRHSLA  180
FPVFESSTQR CVGVIEVVTP EKDLSCSLYF EYSIYKDFEK FGLKCSVVFD HEAMELDDDK  240
NEAHKVAFDE IKNMLKRVCD VHDVPFAQAW VPCKMGCPCR ALVDGGILHA SCCYKKVDYG  300
EDEDGYDYDE DDYGEYDDFR HVSSLSHSKN GVGVVGRALL STNMVFCRDV TQLSLTEYPL  360
AHYAREAGLS GCFAICLESN CTGNDVYVLE FFMPMSNNAS ENPHTSLRKI LETMKKNLSC  420
FRVASREELG EELHIEEISI QNGEKLDPVQ IPQTTISLPR LELSQSKVAV MQVDSSDQQL  480
VNAINTGSNA GGTEHSNFAI ACTQEKSTVK VSKMKGNKSG GTVKASKREG NNKIKIPLED  540
ILQNSALSLE NAAKNLKVSK STLKRVCRPY GVKRWPPHIN KVGCSQLDES APCVNSDHLP  600
STQSLATIVH TEPYDTTMQD ANIVTIKAKY GEGVTIKFPL SLSSSFLQLQ QEVAKRLDLK  660
AGTYYVKYED EDGELILIGC DEDLQDYMHD SRSLGRSSIV VLLEQKLPIT DHKKEKIKKL  720
LITHRTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-76	Nin-like family protein