PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097640.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family AP2
Protein Properties Length: 112aa    MW: 13064 Da    PI: 10.5321
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.75.7e-086393336
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                    y+GV+++++ grW A+I  +     +k  +lg+f
  XP_028097640.1 63 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 93
                    9***************988532...5*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MEAKAARAYD LAALKYWGPS THINFPLENY QQELEHMKNM TRQEYVAHLR RKSSGFSRGA  60
SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFSEFLCIF SIYLGKNLKL NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.14e-47AP2 family protein