PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097662.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 680aa MW: 79127.8 Da PI: 6.9808

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.7	5.8e-16	57	143	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y +Y+k+ GF v+k++ kk +ge + t+ C++ k+ ++++ + r++trtgCka+++ ++ dg w + +l+leHnH+++p XP_028097662.1 57 EYYATYGKKNGFAVSKKNCKKG-GDGEKKYITLACTRARKAIIKTSN---PVKLRPQTRTGCKACINAILQPDGMWLLRSLVLEHNHKMSP 143 69*************99987.89999*******99998877...9999********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MDEEIWSGSS SEGINEINIE NEMEETENVE VEPENVEVET EDPKVGMMFK SSDEVYEYYA 60 TYGKKNGFAV SKKNCKKGGD GEKKYITLAC TRARKAIIKT SNPVKLRPQT RTGCKACINA 120 ILQPDGMWLL RSLVLEHNHK MSPTKSRFFK QNRILEPHVK RRFELNDRAG IRMNKNFTSL 180 VLEAGGREKL SYLEKDCRNH IDKVHCLRLE EGDATAMYNY FVKMQGDNSD FFYVLDLDGN 240 GRLQNVFWAD ARSRATFKEF GDVVTFDTTY LVNKYDMPFA PFVGVNHHGQ STLLGCGLIS 300 HEDTETFTWL FQSWLACMSG FPPNTIITDQ DKAMKKATQI VFPNARHRWC LWHIMKKLPE 360 QLRGYKEYEA IKFGIQNAVY DSLTTEEFEE NWGKFIEEYQ LHSNDWLLRL YEERHRWVPA 420 FVKDIFWTGM STTQRSESMH AFFDGYINSK TTLKQFVEQY ENAMAKKVEN ENGEKFNSLN 480 SYIPCITQYP FEKQFQNAYT IAKFKEFQQE VVGKIYCNLS LCSEDLNFSV YEVSEDVPFG 540 ESLRLATFTV YLKEDSSETN CSCQLFEFRG IVCRHQIAVL MKKRIHHMPD KYILRRWNKN 600 VKRCHTKVHI SYDNSSIKPK ARRYDKMFNV FNEVADLATS CDNKCDKVVE QLRELKGELK 660 EEVDVVSGSN KFGSMSTQNA

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MDEEIWSGSS SEGINEINIE NEMEETENVE VEPENVEVET EDPKVGMMFK SSDEVYEYYA  60
TYGKKNGFAV SKKNCKKGGD GEKKYITLAC TRARKAIIKT SNPVKLRPQT RTGCKACINA  120
ILQPDGMWLL RSLVLEHNHK MSPTKSRFFK QNRILEPHVK RRFELNDRAG IRMNKNFTSL  180
VLEAGGREKL SYLEKDCRNH IDKVHCLRLE EGDATAMYNY FVKMQGDNSD FFYVLDLDGN  240
GRLQNVFWAD ARSRATFKEF GDVVTFDTTY LVNKYDMPFA PFVGVNHHGQ STLLGCGLIS  300
HEDTETFTWL FQSWLACMSG FPPNTIITDQ DKAMKKATQI VFPNARHRWC LWHIMKKLPE  360
QLRGYKEYEA IKFGIQNAVY DSLTTEEFEE NWGKFIEEYQ LHSNDWLLRL YEERHRWVPA  420
FVKDIFWTGM STTQRSESMH AFFDGYINSK TTLKQFVEQY ENAMAKKVEN ENGEKFNSLN  480
SYIPCITQYP FEKQFQNAYT IAKFKEFQQE VVGKIYCNLS LCSEDLNFSV YEVSEDVPFG  540
ESLRLATFTV YLKEDSSETN CSCQLFEFRG IVCRHQIAVL MKKRIHHMPD KYILRRWNKN  600
VKRCHTKVHI SYDNSSIKPK ARRYDKMFNV FNEVADLATS CDNKCDKVVE QLRELKGELK  660
EEVDVVSGSN KFGSMSTQNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-128	FAR1 family protein