PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097718.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 277aa    MW: 31567.4 Da    PI: 8.1429
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.8e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed++l  +++q+G ++W++ ++  g+ R++k+c++rw +yl
   XP_028097718.1 14 KGPWTPQEDQILTSYIQQHGHNNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding52.89.3e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e +++ +++lG++ W++Ia++++ gRt++++k+ w++yl
   XP_028097718.1  67 RGNFSKEEEETIINWHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTYL 112
                      89********************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MVRAPCCEKT GLKKGPWTPQ EDQILTSYIQ QHGHNNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEETIIN WHEMLGNRWS AIAARLPGRT DNEIKNVWHT YLKKRPKNYH  120
TTSNNKEQSI TVPKFDSNAS IESKSMKFHI PTHPRNESPG CAPSSPQQSY SELSSVTDLA  180
GLPNNMVIKN ESETFSQVDE SFWSKKLSAE KSNMKSDFSS NGDELQFLVS SIPAATATNS  240
TMEHGNNKCS FNIDDDMDFW YNLLIRTGGH LPELPEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-81MYB family protein