PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097759.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 200aa    MW: 22159.7 Da    PI: 7.8755
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK63.14.6e-2086134351
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                     + +s+edl+++F  +  dAAk Lgv++++LKr CRq+GI+ WP+Rk ++
  XP_028097759.1  86 SVLSFEDLQQHFGCKRDDAAKALGVSVSTLKRSCRQHGIPWWPSRKKTK 134
                     669*******************************************776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MHEKHDSRLR CVQTPLHARS SPRTIALLGG GEMVQLDSSK QQSLVEFDVT NNSAHLVRAS  60
QSSSTVSHSD ETNSRETLKR KCTTESVLSF EDLQQHFGCK RDDAAKALGV SVSTLKRSCR  120
QHGIPWWPSR KKTKVSKTDC ILLEPQGEKD VSPTCSKMPT EGQTERDNEM VGHLQDQNEG  180
PNLLNTGNGS NKDSITTLIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.12e-14Nin-like family protein