PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097794.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 339aa    MW: 37538.8 Da    PI: 6.5174
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-0854103154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r++ +  rE+ RRdr+N+ f eL ++l ++     +K++K +iL+ +++  k+L
  XP_028097794.1  54 RKVQKADREKLRRDRLNEQFLELGKVLDPD----RPKNDKGSILTDTIQMAKDL 103
                     5677889******************99997....79***********9876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MDQLNHESFC QSIQPPNPSV TEFLASPPIP LAPSIRCHSD SRPETELKDS VAARKVQKAD  60
REKLRRDRLN EQFLELGKVL DPDRPKNDKG SILTDTIQMA KDLTDQVNRL KAEYSTLTEE  120
SRELTQEKND LREEKASLKS DIENLNAQYQ QRLRATFPWA AIDHSVVMHP PSYPMPVPMP  180
VPIAPGSIPM HPSLQPYPFF GNQNHGVIPN PCSTFVPYVT PNTMIEQQTT QYVSPAMQPG  240
TRSHISSKQD SRTKPSDHQG ESKIEKGEAS NDVTTDLELK TPGSTADEGS KCGQRKSKKS  300
LRKENNLTDG SSSSRCSSSR SIQDSSSNSV VGGGKADDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-89bHLH family protein