PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097951.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 157aa    MW: 18265.8 Da    PI: 8.4842
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.91.1e-2537126190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++ Fs+r++  +k+k +++ ++r +vC++eg+r+ +k++  +++++raetrtgC+a+l vk+++ +gk++vt+++++HnH+l+
  XP_028097951.1  37 DFYNTYGGRMWFSIRRDFCRKNKFTNQLICRLLVCNNEGFRKGDKRD-PSSKNPRAETRTGCEARLYVKLDEgTGKYVVTDFKEKHNHDLV 126
                     6*******************************************999.999**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MTVKPQLHFH MDMEPENDCA WKPKQGMTFD SEQCVYDFYN TYGGRMWFSI RRDFCRKNKF  60
TNQLICRLLV CNNEGFRKGD KRDPSSKNPR AETRTGCEAR LYVKLDEGTG KYVVTDFKEK  120
HNHDLVSPEC AHMLSSQRKI STTQAIELDL AAQSGLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-22FAR1 family protein