PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097989.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 381aa    MW: 42254.2 Da    PI: 8.1601
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.6e-13309354655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_028097989.1 309 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKELQ 354
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MNHQDEYRQY NNSHHQQSDS NSGLLRFRSA PSSLLSKFTN VGTDSSEKGP MNNQCSSPEA  60
QRLTHLTSQS LFQDLEEIKP LAINGFSVTS QLPPQYPRHT SGTQLAAMDN TSSYGVVGSI  120
GSSSLMRQTS SPAGLFSHLT AQNGYAALRG LGNYRIGNGT NGDVVSPSSR LRGLMNFSSG  180
MPSSLGMLSQ ISEIDNESVE GSCHEDIKLG NGSRDPQFYS PGYAFGSWND SSHIHDNFSV  240
LKRDLDNDEK LFTGIQNGEL ENRMHILSHH LSLPKTSAEM ANMEKLLHFQ ETVPCKVRAK  300
RGCATHPRSI AERVRRTRIS ERMRKLQELV PNMDKQTNTA DMLDLAVEYI KELQKQYKIL  360
SENRANCKCS SLQKPLPNLS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.12e-91bHLH family protein