PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028098167.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 378aa MW: 41887.7 Da PI: 8.3703

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028098167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	131.4	3.3e-41	161	255	2	96
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlwseeDeiv+L+G+i+++ak+g++p +d++afy+f+kks++++vsk+ql+eK+rrLKkK++++ +k+k g++ +fsk+h+qk++elskkiW XP_028098167.1 161 LFQRLWSEEDEIVILKGMIEYTAKNGSDPLADMNAFYDFIKKSLHIDVSKTQLSEKVRRLKKKYENNASKSKMGEDRTFSKAHEQKAYELSKKIW 255 79********************************************************************************************* PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MANNGRPEPE QSSEEEEEAS SEENEDQEDS ESEQNQLKNT SSKKPLSSLK KPVIAQTSTP 60 KPQSSSEDDS GSESDSESDP PPTNPRIKPL ASKPMEEDPP KATRKPRSKP GPAKSPAKRP 120 APSENNSNQE SKRARKKAVD SDVVVQEDST KKTGDDTKKQ LFQRLWSEED EIVILKGMIE 180 YTAKNGSDPL ADMNAFYDFI KKSLHIDVSK TQLSEKVRRL KKKYENNASK SKMGEDRTFS 240 KAHEQKAYEL SKKIWFGGAN SVGVDSPKVN GKTRKNQSQR AIAASPKVDS GKEETKMQVE 300 PSAGVLRSIG FNSSTGQSSL EGGILKDGFH LISGPKKLEL EEKWKKLAVE EVELFLKRTQ 360 LICEQTKVVL EAIKSSDH

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MANNGRPEPE QSSEEEEEAS SEENEDQEDS ESEQNQLKNT SSKKPLSSLK KPVIAQTSTP  60
KPQSSSEDDS GSESDSESDP PPTNPRIKPL ASKPMEEDPP KATRKPRSKP GPAKSPAKRP  120
APSENNSNQE SKRARKKAVD SDVVVQEDST KKTGDDTKKQ LFQRLWSEED EIVILKGMIE  180
YTAKNGSDPL ADMNAFYDFI KKSLHIDVSK TQLSEKVRRL KKKYENNASK SKMGEDRTFS  240
KAHEQKAYEL SKKIWFGGAN SVGVDSPKVN GKTRKNQSQR AIAASPKVDS GKEETKMQVE  300
PSAGVLRSIG FNSSTGQSSL EGGILKDGFH LISGPKKLEL EEKWKKLAVE EVELFLKRTQ  360
LICEQTKVVL EAIKSSDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	9e-32	GeBP family protein