PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028098221.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 257aa    MW: 28574.5 Da    PI: 7.6146
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028098221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.91.8e-142883153
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerr 53
                    +fYn+Y+ +vGFs+rk++ +k+++++eit+rtfvC+keg+r  +k++   ++ +++
  XP_028098221.1 28 DFYNTYGGKVGFSIRKAYANKHRQTKEITSRTFVCYKEGSRGIDKRDplvKNPRQE 83
                    6****************************************999988664333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEENNIVDDC GWKPKVGMPF DSEQAAYDFY NTYGGKVGFS IRKAYANKHR QTKEITSRTF  60
VCYKEGSRGI DKRDPLVKNP RQEGGADYTP QCESQPHFRM VNNSIQSGGT VYTSQGESQP  120
HFVMGGNSIQ SGDAIYTCQG QSQSCFVMGG NSTQDHGLRV NFSQSQPRFV MGINYNKDHR  180
HDMYISPSQL RPQVLMGGTS GPPLTYGTYD GNNTAQSMPF VYPTHRSFQG LLRGTSVENF  240
AVHLSQTSHS PADNHVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-12FAR1 family protein